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Prevelige Publications Prevelige Publications | Lab
Member Publications 2013 PUBLICATIONS Servid A, Jordan P, O'Neil A, Prevelige P, Douglas T. (2013) Location of the bacteriophage p22 coat protein C-terminus provides opportunities for the design of capsid-based materials. Biomacromolecules 14:2989-95 Li R, Cherwa JE Jr, Prevelige PE Jr. (2013) Φ29 Scaffolding and connector structure-function relationship studied by trans-complementation. Virology;444:355-62 Cox, R., T. J. Green, S. Purushotham, C. Deivanayagam, G. J. Bedwell, P. E. Prevelige and M. Luo (2013). Structural and Functional Characterization of the Mumps Virus Phosphoprotein. J Virol. Culpepper, B. K., D. S. Morris, P. E. Prevelige and S. L. Bellis (2013). Engineering nanocages with polyglutamate domains for coupling to hydroxyapatite biomaterials and allograft bone. Biomaterials 34: 2455-2462. Echlin, H., F. Zhu, Y. Li, Z. Peng, T. Ruiz, G. J. Bedwell, P. E. Prevelige, Jr. and H. Wu (2013). Gap2 promotes the formation of a stable protein complex required for mature fap1 biogenesis. J Bacteriol 195: 2166-2176. Kale, A., Y. Bao, Z. Zhou, P. E. Prevelige and A. Gupta (2013). Directed self-assembly of CdS quantum dots on bacteriophage P22 coat protein templates. Nanotechnology 24: 045603. 2012 PUBLICATIONS Lucon, J., S. Qazi, M. Uchida, G. J. Bedwell, B. LaFrance, P. E. Prevelige, Jr. and T. Douglas (2012). "Use of the interior cavity of the P22 capsid for site-specific initiation of atom-transfer radical polymerization with high-density cargo loading." Nat Chem 4: 781-788. O'Neil, A., P. E. Prevelige, G. Basu and T. Douglas (2012). "Coconfinement of fluorescent proteins: spatially enforced communication of GFP and mCherry encapsulated within the P22 capsid." Biomacromolecules 13: 3902-3907. Qazi S, Liepold LO, Abedin J, Johnson B, Prevelige PE, Frank JA, Douglas T, (2012) P22 viral capsids as nanocomposite high-relaxivity MRI contrast agents. Mol Pharm, 2012. Patterson DP, Prevelige PE, Douglas T, (2012) Nanoreactors by programmed enzyme encapsulation inside the capsid of the bacteriophage p22. ACS Nano, 6:5000-5009. Prevelige PE, Fane BA, (2012) Building the machines: scaffolding protein functions during bacteriophage morphogenesis. Adv Exp Med Biol, 726:325-350. Uchida M, Morris DS, Kang S, Jolley CC, Lucon J, Liepold LO, LaFrance B, P.E. Prevelige PE, Douglas T, (2012) Site-directed coordination chemistry with P22 virus-like particles. Langmuir, 28:1998-2006.
Shen L , Bao N, Zhou Z , Prevelige PE, Gupta A, (2011) Materials design using genetically engineered protein J. Mater. Chem. 21:18868-18876 Cortines JR, Monroe EB, Kang S, Prevelige PE Jr (2011) A retroviral chimeric capsid protein reveals the role of the N-terminal β-hairpin in mature core assembly. J Mol Biol. 410:641-52. Prevelige PE Jr. (2011) New approaches for antiviral targeting of HIV assembly. J Mol Biol. 410:634-40. O'Neil A, Reichhardt C, Johnson B, Prevelige PE, Douglas T (2011) Genetically programmed in vivo packaging of protein cargo and its controlled release from bacteriophage P22. Angew Chem Int Ed Engl. 50:7425-8. Reichhardt C, Uchida M, O'Neil A, Li R, Prevelige PE, Douglas T. (2011) Templated assembly of organic-inorganic materials using the core shell structure of the P22 bacteriophage. Chem Commun (Camb). 47:6326-8. Olia AS, Prevelige PE Jr, Johnson JE, Cingolani G. (2011) Three-dimensional structure of a viral genome-delivery portal vertex. Nat Struct Mol Biol.18:597-603. Tang J, Lander GC, Olia AS, Li R, Casjens S, Prevelige P Jr, Cingolani G, Baker TS, Johnson JE.(2011) Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22. Structure. 19:496-502. 2010 PUBLICATIONS Shen, L., Bao, N., Prevelige, P. E. & Gupta, A. (2010) Fabrication of Ordered Nanostructures of Sulfide Nanocrystal Assemblies over Self-Assembled Genetically Engineered P22 Coat Protein. J Am Chem Soc. 132, 17354–17357. Monroe, E. B., Kang, S., Kyere, S. K., Li, R. & Prevelige, P. E., Jr. (2010) Hydrogen/deuterium exchange analysis of HIV-1 capsid assembly and maturation. Structure 18, 1483-1491. Fledderman, E. L., Fujii, K., Ghanam, R. H., Waki, K., Prevelige, P. E., Freed, E. O. & Saad, J. S.(2010) Myristate Exposure in the Human Immunodeficiency Virus Type 1 Matrix Protein Is Modulated by pH. Biochemistry. 49, 9551–9562. Kang, S., Uchida, M., O'Neil, A., Li, R., Prevelige, P. E. & Douglas, T. (2010) Implementation of p22 viral capsids as nanoplatforms. Biomacromolecules 11, 2804-2809. Fu, C. Y., Uetrecht, C., Kang, S., Morais, M. C., Heck, A. J., Walter, M. R. & Prevelige, P. E., Jr. (2010) A docking model based on mass spectrometric and biochemical data describes phage packaging motor incorporation. Mol Cell Proteomics 9, 1764-1773. Shen, L,, Bao, N., Prevelige, P.E., & Gupta, A.(2010) Escherichia coli Bacteria-Templated Synthesis of Nanoporous Cadmium Sulfide Hollow Microrods for Efficient Photocatalytic Hydrogen Production J. Phys. Chem. C, , 114, 2551–2559. 2009 PUBLICATIONS Fu, C.Y., and Prevelige, P.E., Jr. (2009). In vitro incorporation of the phage Phi29 connector complex. Virology 394, 149-153. Cox, R., Green, T.J., Qiu, S., Kang, J., Tsao, J., Prevelige, P.E., He, B., and Luo, M. (2009). Characterization of a mumps virus nucleocapsidlike particle. J. Virol 83, 11402-11406. Lander, G.C., Khayat, R., Li, R., Prevelige, P.E., Potter, C.S., Carragher, B., and Johnson, J.E. (2009). The P22 tail machine at subnanometer resolution reveals the architecture of an infection conduit. Structure 17, 789-799. Kang, S., Mou, L., Lanman, J., Velu, S., Brouillette, W.J., and Prevelige, P.E., Jr. (2009). Synthesis of biotin-tagged chemical cross-linkers and their applications for mass spectrometry. Rapid Commun Mass Spectrom 23, 1719-1726. 2008 PUBLICATIONS Kang, S., Oltrogge, L.M., Broomell, C.C., Liepold, L.O., Prevelige, P.E., Young, M., and Douglas, T. (2008). Controlled assembly of bifunctional chimeric protein cages and composition analysis using noncovalent mass spectrometry. J. Am. Chem. Soc 130, 16527-16529. Tuma, R, Tsuruta, H, French, KH, Prevelige, PE. (2008) Detection of intermediates and kinetic control during assembly of bacteriophage P22 procapsid. J Mol Biol 381:1395-1406. Kang S, Lander GC, Johnson JE, Prevelige PE. (2008) Development of bacteriophage p22 as a platform for molecular display: genetic and chemical modifications of the procapsid exterior surface. Chembiochem 9:514-8. Poliakov A, Jardine P, Prevelige PE. (2008) Hydrogen/deuterium exchange on protein solutions containing nucleic acids: utility of protamine sulfate. Rapid Commun Mass Spectrom.22:2423-28. Kang S, Poliakov A, Sexton J, Renfrow MB, Prevelige PE Jr.(2008) Probing Conserved Helical Modules of Portal Complexes by Mass Spectrometry-based Hydrogen/Deuterium Exchange. J Mol Biol. 381:772-84. Chang JR, Poliakov A, Prevelige PE, Mobley JA, Dokland T. (2008) Incorporation of scaffolding protein gpO in bacteriophages P2 and P4. Virology. 370:352-61. 2007 PUBLICATIONS Nemecek D, Gilcrease EB, Kang S, Prevelige PE Jr, Casjens S, Thomas GJ Jr (2007). Subunit conformations and assembly states of a DNA-translocating motor: the terminase of bacteriophage P22. J Mol Biol 374:817-36. Braga CA, Carvalho D, Lara FA, Cortines JR, Moore SD, Prevelige PE
Jr, Foguel D. (2007) An aggregation-prone intermediate species is
present in the unfolding pathway of the monomeric portal protein of
bacteriophage P22: implications for portal assembly. Biochemistry
46:7353-64. Fu, C. Y., M. C. Morais, et al. (2007) Molecular dissection of o29
scaffolding protein function in an in vitro assembly system. J
Mol Biol 366:1161-73. Poliakov, A., E. van Duijn, et al. (2007) Macromolecular mass spectrometry
and electron microscopy as complementary tools for investigation
of the heterogeneity of bacteriophage portal assemblies. J
Struct Biol 157: 371-83. 2006 PUBLICATIONS Lander GC, Tang L, Casjens SR, Gilcrease EB, Prevelige P, Poliakov
A, Potter CS, Carragher B, Johnson JE. (2006) The structure of
an infectious P22 virion shows the signal for headful DNA packaging.
Science.
312:1791-5. Fu CY, Prevelige PE Jr. (2006) Dynamic motions of free and bound
O29 scaffolding protein identified by hydrogen deuterium exchange
mass spectrometry. Protein
Sci. 15:731-43. Kang S, Hawkridge AM, Johnson KL, Muddiman DC, Prevelige PE Jr (2006)
Identification of subunit-subunit interactions in bacteriophage
P22 procapsids by chemical cross-linking and mass spectrometry. J
Proteome Res. 5:370-7. 2005 PUBLICATIONS Tang L, Marion WR, Cingolani G,
Prevelige PE, Johnson JE.
(2005)
Three-dimensional structure of the bacteriophage P22 tail machine.
EMBO
J. Jun 15;24(12):2087-95. Kang S, Prevelige PE Jr.
(2005)
Domain study of bacteriophage p22 coat protein and characterization
of the capsid lattice transformation by hydrogen/deuterium exchange.
J
Mol Biol. Apr 15;347(5):935-48. 2004 PUBLICATIONS Douglas CC, Thomas D, Lanman J, Prevelige PE Jr.
(2004)
Investigation of N-terminal domain charged residues on the assembly
and stability of HIV-1 CA.
Biochemistry.
Aug 17;43(32):10435-41. Lanman J, Lam TT, Emmett MR, Marshall AG, Sakalian M, Prevelige PE
Jr.
(2004)
Key interactions in HIV-1 maturation identified by hydrogen-deuterium
exchange.
Nat
Struct Mol Biol. Jul;11(7):676-7. 2003 PUBLICATIONS Jiang, W., Li, Z., Zhang, Z., Baker,
M. L., Prevelige, P. E. & Chiu,
W. (2003) Coat protein fold and maturation transition
of bacteriophage P22 seen at subnanometer resolutions. Nat.
Struct. Biol. 10:131-5. Lanman, J, Lam, TT, Barnes, S, Sakalian, M, Emmett, MR, Marshall,
AG, Prevelige Jr., P.E. (2003) Identification of Novel Interactions
in HIV-1 Capsid Protein Assembly by High-resolution Mass Spectrometry. J.
Mol. Biol.325:759 2002 PUBLICATIONS Lam, T., Lanman, J.K., Emmett, M.E., Hendrickson, C.L., Marshall,
A.G., Prevelige Jr. P.E. (2002) Mapping of Protein:Protein contact
surfaces by hydrogen/deuterium exchange followed by on-line HPLC electrospray
ioniziation fourier transform ion cyclotron resonance mass spectrometry. J.
Chromat. 982:85. Cingolani G., Moore S.D., Prevelige Jr., P.E., Johnson J.E., (2002)
Preliminary crystallographic analysis of the bacteriophage P22 portal
protein. J.
Structural Biology 139:46 Moore, S.D, and Prevelige Jr. P.E. (2002) Bacteriophage P22 Portal
Vertex Formation In Vivo. J.
Mol. Biol 315:975-994. 2001 PUBLICATIONS Parker, M.H. Brouillette C.G., Prevelige Jr. P.E. (2001) Calorimetric
evidence of two thermodynamic classes of scaffolding binding sites
with the bacteriophage P22 procapsid. Biochemistry
40:8962 Tuma, R. Coward, L.U., Kirk, M.C., Barnes, S. Prevelige Jr. P.E. (2001)Hydrogen/deuterium
exchange as a probe of folding and assembly in viral capsids J.
Mol. Biol. 306:389-396. Moore, S.D. and Prevelige Jr. P.E. Structural transformations accompanying
the assembly of bacteriophage P22portal rings in vitro. J.
Biol. Chem. 276:6779-6788, Tuma, R., Tsuruta, H., Benevides, J.M., Prevelige Jr. P.E., Thomas
Jr. G. J. (2001) Characterization of subunit structural changes accompanying
assembly of the bacteriophage P22 procapsid Biochemistry
40:665-674. Sun, Y., Parker, M.H., Weigele, P. Casjens, S., Prevelige Jr. P.E.,
and Krishna, N.R. Structure of the Coat Protein-binding Domain of the
Scaffolding Protein from a Double-stranded DNA Virus J.
Mol. Biol.297:1195-1202. < 2000 PUBLICATIONS Zhang, Z., Greene B., Thuman-Commike, P.A., Jakana, J. Prevelige Jr.
P.E., King, J. Chiu, W. (2000) Visualization of the maturation transition
in bacteriophage P22 by electron cryomicroscopy J.
Mol. Biol.297:615-626 Thuman-Commike P.A., Greene, B., Jakana, J. Prevelige Jr. P.E., and
Chiu, W. (2000) Identification of additional coat/scaffolding interactions
in a bacteriophage P22 mutant defective in maturation. J.
Virol. 74:3871-3873 Lanman, J. , Tuma, R., Prevelige Jr. P.E. (1999) Identification and
Characterization of the Domain Structure of Bacteriophage P22
Coat Protein. Biochemistry
38:14614-14623 Thuman-Commike, P.A., Greene, B., Malinski, J., Burbea, M., McGough,
A., Chiu, W., Prevelige Jr. P.E., (1999) Mechanism of scaffolding-directed
virus assembly suggested by comparison of scaffolding containing and
scaffolding lacking P22 procapsids Biophys.
J. 76:3267-3277 Thuman-Commike P.A., Tsuruta, H., Greene, B, Prevelige Jr. P.E., King,
J., Chiu, W. (1999) Solution X-ray scattering based correction of electron
cryomicroscopy images for reconstruction of virus particles. Biophys.
J. ,76:2249-2261 De Sousa, P.C., Tuma, R., Prevelige Jr. P.E., Silva, J.L., Foguel,
D. (1999) Cavity defects in the procapsid of bacteriophage P22 and
the mechanism of capsid maturation. J.
Mol. Biol., 287:527-538 Schwartz R, Shor ,P.W., Prevelige Jr P. E., Berger B (1998) Local
rules simulation of the kinetics of virus capsid self-assembly. Biophys.
J. 75:2626-36 Parker, M.H., and Prevelige Jr. P.E. (1998) Electrostatic interactions drive Scaffolding/Coat protein binding and procapsid maturation in bacteriophage P22.Virology 250:337-49 Tuma, R. Prevelige Jr. P.E., Thomas Jr. G.J. (1998) Mechanism
of Capsid Maturation in a Double Stranded DNA Virus Proc.
Natl. Acad. Sci., USA, 95:9885-9890. Parker, M.H., Casjens, S., Prevelige Jr. P.E. (1998) Functional Domains of Bacteriophage P22 Scaffolding Protein. J. Mol. Biol. 281:69-79. Tuma, R., Parker, M.H., Weigele, P., Sampson, L., Sun, Y., Krishna, N.R., Casjens, S., Thomas Jr. G.J., Prevelige Jr., P.E. (1998) A Helical Coat Protein Recognition Domain of the Bacteriophage P22 Scaffolding Protein., J. Mol. Biol. 281:81-94 Prevelige Jr. P.E. (1998) Inhibiting Virus Capsid Assembly by Altering
the Polymerization Pathway. Trends
in Biotechnology 16:61-65 Burbea, M., Prevelige Jr. P.E.. Self Assembly of Bacteriophage. in "Self-Assembling Complexes for Gene Delivery: from Chemistry to Clinical Trial" A.V. Kabanov, L.W. Seymour, P.L. Felgner (Eds.) John Wiley &Sons Ltd. New York, 1997. Parker, M.H., Jablonsky, M., Casjens, S. Sampson, L., Krishna, N.R., Prevelige Jr., P.E. (1997) Cloning, purification, an preliminary characterization by circular dichroism and NMR of a carboxyl-terminal domain of the bacteriophage P22 scaffolding protein. Protein Science 6: 1583-1586 Parker, M. Stafford III, W.F, Prevelige Jr. P.E. (1997) Bacteriophage P22 Scaffolding Protein forms Oligomers in Solution. J. Mol. Biol 268:655-665. Thuman-Commike, P.A., Greene, B., Jakana, J., Prasad, B.V.V., King, J., Prevelige, P.E. Jr., Chiu W. (1997) Three-dimensional Structure of Scaffolding Containing Phage P22 Procapsids by Electron Cyro-microscopy. J. Mol. Biol. 260:85-89 Tuma, R., Prevelige Jr. P.E., Thomas, G.J. (1996) Structural Transitions in the Scaffolding and Coat Proteins of P22 During Virus Assembly and Disassembly. Biochemistry 35:4619-4627. Silva J.L, Foguel D., Da Poian, A.T. Prevelige Jr. P.E (1996). The Use of Hydrostatic Pressure as a Tool to Study Viruses and Other Macromolecular Assemblages. Current Opinion in Structural Biology 6:166-175 Foguel, D., Teschke, C.M., Prevelige Jr. P.E., and Silva J. (1995) The Role of Entropic Interactions in Stabilizing Viral Capsids: Single Amino Acid Substitutions in P22 Bacteriophage Coat Protein Resulting in Loss of Pressure Stability of the Shells Biochemistry 34 1120-1126. Prevelige Jr., P.E. and Silva J, (1993) Pressure Denaturation of P22 Coat Protein Monomers and Its Entropic Stabilization in the Icosahedral Shells, Biophys.J. 66:1631-1641. Teschke, C.M., King,J. and Prevelige Jr., P.E., (1993)Inhibition of Viral Capsid Assembly by 1,1'-bi(4-anilino)napthalene-5,5'-disulfonic acid (bisANS). Biochemistry 32:10658-10665 Prasad, B.V.V. Prevelige Jr., P.E., Marietta, E, Chen, R, Thomas, D, King, J, and Chiu, W. (1993) Structural Transformation Associated with Genome Packaging in a Bacterial Virus. J. Mol. Biol. 231:65-74 Prevelige Jr. P.E., Thomas, D, Aubrey, K.L., Towse, S.A., Thomas Jr. G.J. (1993) Subunit Conformational Changes Accompanying Bacteriophage P22 Capsid Maturation. Biochemistry 32:537-543 Prevelige Jr. P.E., Thomas, D., and King, J. (1993) Nucleation and Growth Phases in the Polymerization of Coat and Scaffolding Subunits into Icosahedral Shells Biophys. J. 64: 824-835 Prevelige Jr., P.E. (1993) The Assembly of Bacteriophage P22: A Model for ds-DNA Virus Assembly in Progress in Medical Virology Volume 40 (J. Melnick, ed) Karger Publishing, Basel Thomas, D. and Prevelige Jr., P.E. (1991) A Pilot Protein Participates in the Initiation of P22 Procapsid Assembly Virology 182: 673-681. Prevelige Jr., P.E., Thomas, D., King, J., Towse, S.,and Thomas, G.J. (1990) Conformational States of the Bacteriophage P22 Capsid Subunit in Relation to Self-Assembly. Biochemistry 29: 5626-5633 Prevelige Jr., P. E., Thomas, D. and King, J. (1988) Scaffolding Protein Regulates the Polymerization of P22 Coat Subunits into Icosahedral Shells in vitro.. J. Mol. Biol. 202: 743-757.
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