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Prevelige Publications

Prevelige Publications | Lab Member Publications

2013 PUBLICATIONS

Servid A, Jordan P, O'Neil A, Prevelige P, Douglas T. (2013) Location of the bacteriophage p22 coat protein C-terminus provides opportunities for the design of capsid-based materials. Biomacromolecules 14:2989-95 Click here for PDF version of article.

Li R, Cherwa JE Jr, Prevelige PE Jr. (2013) Φ29 Scaffolding and connector structure-function relationship studied by trans-complementation. Virology;444:355-62 Click here for PDF version of article.

Cox, R., T. J. Green, S. Purushotham, C. Deivanayagam, G. J. Bedwell, P. E. Prevelige and M. Luo (2013). Structural and Functional Characterization of the Mumps Virus Phosphoprotein. J Virol. Click here for PDF version of article.

Culpepper, B. K., D. S. Morris, P. E. Prevelige and S. L. Bellis (2013). Engineering nanocages with polyglutamate domains for coupling to hydroxyapatite biomaterials and allograft bone. Biomaterials 34: 2455-2462. Click here for PDF version of article.

Echlin, H., F. Zhu, Y. Li, Z. Peng, T. Ruiz, G. J. Bedwell, P. E. Prevelige, Jr. and H. Wu (2013). Gap2 promotes the formation of a stable protein complex required for mature fap1 biogenesis. J Bacteriol 195: 2166-2176. Click here for PDF version of article.

Kale, A., Y. Bao, Z. Zhou, P. E. Prevelige and A. Gupta (2013). Directed self-assembly of CdS quantum dots on bacteriophage P22 coat protein templates. Nanotechnology 24: 045603. Click here for PDF version of article.

2012 PUBLICATIONS

Lucon, J., S. Qazi, M. Uchida, G. J. Bedwell, B. LaFrance, P. E. Prevelige, Jr. and T. Douglas (2012). "Use of the interior cavity of the P22 capsid for site-specific initiation of atom-transfer radical polymerization with high-density cargo loading." Nat Chem 4: 781-788. Click here for PDF version of article.

O'Neil, A., P. E. Prevelige, G. Basu and T. Douglas (2012). "Coconfinement of fluorescent proteins: spatially enforced communication of GFP and mCherry encapsulated within the P22 capsid." Biomacromolecules 13: 3902-3907. Click here for PDF version of article.

Qazi S, Liepold LO, Abedin J, Johnson B, Prevelige PE, Frank JA, Douglas T, (2012) P22 viral capsids as nanocomposite high-relaxivity MRI contrast agents. Mol Pharm, 2012. Click here for PDF version of article.

Patterson DP, Prevelige PE, Douglas T, (2012) Nanoreactors by programmed enzyme encapsulation inside the capsid of the bacteriophage p22. ACS Nano, 6:5000-5009. Click here for PDF version of article.

Prevelige PE, Fane BA, (2012) Building the machines: scaffolding protein functions during bacteriophage morphogenesis. Adv Exp Med Biol, 726:325-350. Click here for PDF version of article.

Uchida M, Morris DS, Kang S, Jolley CC, Lucon J, Liepold LO, LaFrance B, P.E. Prevelige PE, Douglas T, (2012) Site-directed coordination chemistry with P22 virus-like particles. Langmuir, 28:1998-2006. Click here for PDF version of article.


2011 PUBLICATIONS

Shen L , Bao N, Zhou Z , Prevelige PE, Gupta A, (2011) Materials design using genetically engineered protein J. Mater. Chem. 21:18868-18876 Click here for PDF version of article.

Cortines JR, Monroe EB, Kang S, Prevelige PE Jr (2011) A retroviral chimeric capsid protein reveals the role of the N-terminal β-hairpin in mature core assembly. J Mol Biol. 410:641-52. Click here for PDF version of article.

Prevelige PE Jr. (2011) New approaches for antiviral targeting of HIV assembly. J Mol Biol. 410:634-40. Click here for PDF version of article.

O'Neil A, Reichhardt C, Johnson B, Prevelige PE, Douglas T (2011) Genetically programmed in vivo packaging of protein cargo and its controlled release from bacteriophage P22. Angew Chem Int Ed Engl. 50:7425-8. Click here for PDF version of article.

Reichhardt C, Uchida M, O'Neil A, Li R, Prevelige PE, Douglas T. (2011) Templated assembly of organic-inorganic materials using the core shell structure of the P22 bacteriophage. Chem Commun (Camb). 47:6326-8. Click here for PDF version of article.

Olia AS, Prevelige PE Jr, Johnson JE, Cingolani G. (2011) Three-dimensional structure of a viral genome-delivery portal vertex. Nat Struct Mol Biol.18:597-603. Click here for PDF version of article.

Tang J, Lander GC, Olia AS, Li R, Casjens S, Prevelige P Jr, Cingolani G, Baker TS, Johnson JE.(2011) Peering down the barrel of a bacteriophage portal: the genome packaging and release valve in p22. Structure. 19:496-502. Click here for PDF version of article.


2010 PUBLICATIONS

Shen, L., Bao, N., Prevelige, P. E. & Gupta, A. (2010) Fabrication of Ordered Nanostructures of Sulfide Nanocrystal Assemblies over Self-Assembled Genetically Engineered P22 Coat Protein. J Am Chem Soc. 132, 17354–17357. Click here for PDF version of article.

Monroe, E. B., Kang, S., Kyere, S. K., Li, R. & Prevelige, P. E., Jr. (2010) Hydrogen/deuterium exchange analysis of HIV-1 capsid assembly and maturation. Structure 18, 1483-1491. Click here for PDF version of article.

Fledderman, E. L., Fujii, K., Ghanam, R. H., Waki, K., Prevelige, P. E., Freed, E. O. & Saad, J. S.(2010)  Myristate Exposure in the Human Immunodeficiency Virus Type 1 Matrix Protein Is Modulated by pH. Biochemistry. 49, 9551–9562. Click here for PDF version of article.

Kang, S., Uchida, M., O'Neil, A., Li, R., Prevelige, P. E. & Douglas, T. (2010) Implementation of p22 viral capsids as nanoplatforms. Biomacromolecules 11, 2804-2809. Click here for PDF version of article.

Fu, C. Y., Uetrecht, C., Kang, S., Morais, M. C., Heck, A. J., Walter, M. R. & Prevelige, P. E., Jr. (2010) A docking model based on mass spectrometric and biochemical data describes phage packaging motor incorporation. Mol Cell Proteomics 9, 1764-1773. Click here for PDF version of article.

Shen, L,, Bao, N., Prevelige, P.E., & Gupta, A.(2010)  Escherichia coli Bacteria-Templated Synthesis of Nanoporous Cadmium Sulfide Hollow Microrods for Efficient Photocatalytic Hydrogen Production J. Phys. Chem. C, , 114, 2551–2559. Click here for PDF version of article.


2009 PUBLICATIONS

Fu, C.Y., and Prevelige, P.E., Jr. (2009). In vitro incorporation of the phage Phi29 connector complex. Virology 394, 149-153. Click here for PDF version of article.

Cox, R., Green, T.J., Qiu, S., Kang, J., Tsao, J., Prevelige, P.E., He, B., and Luo, M. (2009). Characterization of a mumps virus nucleocapsidlike particle. J. Virol 83, 11402-11406. Click here for PDF version of article.

Lander, G.C., Khayat, R., Li, R., Prevelige, P.E., Potter, C.S., Carragher, B., and Johnson, J.E. (2009). The P22 tail machine at subnanometer resolution reveals the architecture of an infection conduit. Structure 17, 789-799. Click here for PDF version of article.

Kang, S., Mou, L., Lanman, J., Velu, S., Brouillette, W.J., and Prevelige, P.E., Jr. (2009). Synthesis of biotin-tagged chemical cross-linkers and their applications for mass spectrometry. Rapid Commun Mass Spectrom 23, 1719-1726. Click here for PDF version of article.


2008 PUBLICATIONS

Kang, S., Oltrogge, L.M., Broomell, C.C., Liepold, L.O., Prevelige, P.E., Young, M., and Douglas, T. (2008). Controlled assembly of bifunctional chimeric protein cages and composition analysis using noncovalent mass spectrometry. J. Am. Chem. Soc 130, 16527-16529. Click here for PDF version of article.

Tuma, R, Tsuruta, H, French, KH, Prevelige, PE. (2008) Detection of intermediates and kinetic control during assembly of bacteriophage P22 procapsid. J Mol Biol 381:1395-1406. Click here for PDF version of article.

Kang S, Lander GC, Johnson JE, Prevelige PE. (2008) Development of bacteriophage p22 as a platform for molecular display: genetic and chemical modifications of the procapsid exterior surface. Chembiochem 9:514-8. Click here for PDF version of article.

Poliakov A, Jardine P, Prevelige PE. (2008) Hydrogen/deuterium exchange on protein solutions containing nucleic acids: utility of protamine sulfate. Rapid Commun Mass Spectrom.22:2423-28. Click here for PDF version of article.

Kang S, Poliakov A, Sexton J, Renfrow MB, Prevelige PE Jr.(2008) Probing Conserved Helical Modules of Portal Complexes by Mass Spectrometry-based Hydrogen/Deuterium Exchange. J Mol Biol. 381:772-84. Click here for PDF version of article.

Chang JR, Poliakov A, Prevelige PE, Mobley JA, Dokland T. (2008)  Incorporation of scaffolding protein gpO in bacteriophages P2 and P4. Virology. 370:352-61. Click here for PDF version of article.


2007 PUBLICATIONS

Nemecek D, Gilcrease EB, Kang S, Prevelige PE Jr, Casjens S, Thomas GJ Jr (2007). Subunit conformations and assembly states of a DNA-translocating motor: the terminase of bacteriophage P22. J Mol Biol 374:817-36. Click here for PDF version of article.

Braga CA, Carvalho D, Lara FA, Cortines JR, Moore SD, Prevelige PE Jr, Foguel D. (2007) An aggregation-prone intermediate species is present in the unfolding pathway of the monomeric portal protein of bacteriophage P22: implications for portal assembly. Biochemistry 46:7353-64. Click here for PDF version of article.

Fu, C. Y., M. C. Morais, et al. (2007) Molecular dissection of o29 scaffolding protein function in an in vitro assembly system. J Mol Biol 366:1161-73. Click here for PDF version of article.

Poliakov, A., E. van Duijn, et al. (2007) Macromolecular mass spectrometry and electron microscopy as complementary tools for investigation of the heterogeneity of bacteriophage portal assemblies. J Struct Biol 157: 371-83. Click here for PDF version of article.


2006 PUBLICATIONS

Lander GC, Tang L, Casjens SR, Gilcrease EB, Prevelige P, Poliakov A, Potter CS, Carragher B, Johnson JE. (2006) The structure of an infectious P22 virion shows the signal for headful DNA packaging. Science. 312:1791-5. Click here for PDF version of article.

Fu CY, Prevelige PE Jr. (2006) Dynamic motions of free and bound O29 scaffolding protein identified by hydrogen deuterium exchange mass spectrometry. Protein Sci. 15:731-43. Click here for PDF version of article.

Kang S, Hawkridge AM, Johnson KL, Muddiman DC, Prevelige PE Jr (2006) Identification of subunit-subunit interactions in bacteriophage P22 procapsids by chemical cross-linking and mass spectrometry. J Proteome Res. 5:370-7. Click here for PDF version of article.


2005 PUBLICATIONS

Tang L, Marion WR, Cingolani G, Prevelige PE, Johnson JE. (2005) Three-dimensional structure of the bacteriophage P22 tail machine. EMBO J. Jun 15;24(12):2087-95. Click here for PDF version of article.

Kang S, Prevelige PE Jr. (2005) Domain study of bacteriophage p22 coat protein and characterization of the capsid lattice transformation by hydrogen/deuterium exchange. J Mol Biol. Apr 15;347(5):935-48. Click here for PDF version of article.


2004 PUBLICATIONS

Douglas CC, Thomas D, Lanman J, Prevelige PE Jr. (2004) Investigation of N-terminal domain charged residues on the assembly and stability of HIV-1 CA. Biochemistry. Aug 17;43(32):10435-41. Click here for PDF version of article.

Lanman J, Lam TT, Emmett MR, Marshall AG, Sakalian M, Prevelige PE Jr. (2004) Key interactions in HIV-1 maturation identified by hydrogen-deuterium exchange. Nat Struct Mol Biol. Jul;11(7):676-7. Click here for PDF version of article.


2003 PUBLICATIONS

Jiang, W., Li, Z., Zhang, Z., Baker, M. L., Prevelige, P. E. & Chiu, W. (2003) Coat protein fold and maturation transition of bacteriophage P22 seen at subnanometer resolutions. Nat. Struct. Biol. 10:131-5. Click here for PDF version of article.

Lanman, J, Lam, TT, Barnes, S, Sakalian, M, Emmett, MR, Marshall, AG, Prevelige Jr., P.E. (2003) Identification of Novel Interactions in HIV-1 Capsid Protein Assembly by High-resolution Mass Spectrometry. J. Mol. Biol.325:759 Click here for PDF version of article.


2002 PUBLICATIONS

Lam, T., Lanman, J.K., Emmett, M.E., Hendrickson, C.L., Marshall, A.G., Prevelige Jr. P.E. (2002) Mapping of Protein:Protein contact surfaces by hydrogen/deuterium exchange followed by on-line HPLC electrospray ioniziation fourier transform ion cyclotron resonance mass spectrometry. J. Chromat. 982:85. Click here for PDF version of article.

Cingolani G., Moore S.D., Prevelige Jr., P.E., Johnson J.E., (2002) Preliminary crystallographic analysis of the bacteriophage P22 portal protein. J. Structural Biology 139:46 Click here for PDF version of article.

Moore, S.D., and Prevelige Jr. P.E. (2002) A P22 scaffolding protein mutation increases the robustness of head assembly in the presence of excess portal protein. J. Virol 76:10245-10255 Click here for PDF version of article.

Lanman, J., Sexton J., Sakalian., M., Prevelige Jr. P.E. (2002) Kinetic analysis of the role of intersubunit interaction in Human Immunodeficiency Virus Type 1 capsid protein J.Virol 76:6900-6908 Click here for PDF version of article.

Moore, S.D., and Prevelige Jr. P.E. (2002) DNA Packaging: A new class of molecular motors. Current Biology 12:R96

Moore, S.D, and Prevelige Jr. P.E. (2002) Bacteriophage P22 Portal Vertex Formation In Vivo. J. Mol. Biol 315:975-994. Click here for PDF version of article.


2001 PUBLICATIONS

Rodriguez-Casado, A., Moore, S.D., Prevelige Jr. P.E., Thomas Jr. G.J. (2001) Conformation of the portal protein subunit of bacteriophage P22 in relation to portal assembly: Investigation by Raman spectroscopy. Biochemistry 40:13583. Click here for PDF version of article.

Parker, M.H. Brouillette C.G., Prevelige Jr. P.E. (2001) Calorimetric evidence of two thermodynamic classes of scaffolding binding sites with the bacteriophage P22 procapsid. Biochemistry 40:8962 Click here for PDF version of article.

Tuma, R. Coward, L.U., Kirk, M.C., Barnes, S. Prevelige Jr. P.E. (2001)Hydrogen/deuterium exchange as a probe of folding and assembly in viral capsids J. Mol. Biol. 306:389-396. Click here for PDF version of article.

Moore, S.D. and Prevelige Jr. P.E. Structural transformations accompanying the assembly of bacteriophage P22portal rings in vitro. J. Biol. Chem. 276:6779-6788, Click here for PDF version of article.

Tuma, R., Tsuruta, H., Benevides, J.M., Prevelige Jr. P.E., Thomas Jr. G. J. (2001) Characterization of subunit structural changes accompanying assembly of the bacteriophage P22 procapsid Biochemistry 40:665-674. Click here for PDF version of article.

Sun, Y., Parker, M.H., Weigele, P. Casjens, S., Prevelige Jr. P.E., and Krishna, N.R. Structure of the Coat Protein-binding Domain of the Scaffolding Protein from a Double-stranded DNA Virus J. Mol. Biol.297:1195-1202. Click here for PDF version of article.


< 2000 PUBLICATIONS

Zhang, Z., Greene B., Thuman-Commike, P.A., Jakana, J. Prevelige Jr. P.E., King, J. Chiu, W. (2000) Visualization of the maturation transition in bacteriophage P22 by electron cryomicroscopy J. Mol. Biol.297:615-626 Click here for PDF version of article.

Thuman-Commike P.A., Greene, B., Jakana, J. Prevelige Jr. P.E., and Chiu, W. (2000) Identification of additional coat/scaffolding interactions in a bacteriophage P22 mutant defective in maturation. J. Virol. 74:3871-3873 Click here for PDF version of article.

Lanman, J. , Tuma, R., Prevelige Jr. P.E. (1999) Identification and Characterization of the Domain Structure of Bacteriophage P22 Coat Protein. Biochemistry 38:14614-14623 Click here for PDF version of article.

Thuman-Commike, P.A., Greene, B., Malinski, J., Burbea, M., McGough, A., Chiu, W., Prevelige Jr. P.E., (1999) Mechanism of scaffolding-directed virus assembly suggested by comparison of scaffolding containing and scaffolding lacking P22 procapsids Biophys. J. 76:3267-3277 Click here for PDF version of article.

Thuman-Commike P.A., Tsuruta, H., Greene, B, Prevelige Jr. P.E., King, J., Chiu, W. (1999) Solution X-ray scattering based correction of electron cryomicroscopy images for reconstruction of virus particles. Biophys. J. ,76:2249-2261 Click here for PDF version of article.

De Sousa, P.C., Tuma, R., Prevelige Jr. P.E., Silva, J.L., Foguel, D. (1999) Cavity defects in the procapsid of bacteriophage P22 and the mechanism of capsid maturation. J. Mol. Biol., 287:527-538 Click here for PDF version of article.

Schwartz R, Shor ,P.W., Prevelige Jr P. E., Berger B (1998) Local rules simulation of the kinetics of virus capsid self-assembly. Biophys. J. 75:2626-36 Click here for PDF version of article.

Parker, M.H., and Prevelige Jr. P.E. (1998) Electrostatic interactions drive Scaffolding/Coat protein binding and procapsid maturation in bacteriophage P22.Virology 250:337-49

Tuma, R. Prevelige Jr. P.E., Thomas Jr. G.J. (1998)  Mechanism of Capsid Maturation in a Double Stranded DNA Virus Proc. Natl. Acad. Sci., USA, 95:9885-9890. Click here for PDF version of article.

Parker, M.H., Casjens, S., Prevelige Jr. P.E. (1998) Functional Domains of Bacteriophage P22 Scaffolding Protein. J. Mol. Biol. 281:69-79.

Tuma, R., Parker, M.H., Weigele, P., Sampson, L., Sun, Y., Krishna, N.R., Casjens, S., Thomas Jr. G.J., Prevelige Jr., P.E. (1998) A Helical Coat Protein Recognition Domain of the Bacteriophage P22 Scaffolding Protein., J. Mol. Biol. 281:81-94

Prevelige Jr. P.E. (1998) Inhibiting Virus Capsid Assembly by Altering the Polymerization Pathway. Trends in Biotechnology 16:61-65 Click here for PDF version of article.

Burbea, M., Prevelige Jr. P.E.. Self Assembly of Bacteriophage. in "Self-Assembling Complexes for Gene Delivery: from Chemistry to Clinical Trial" A.V. Kabanov, L.W. Seymour, P.L. Felgner (Eds.) John Wiley &Sons Ltd. New York, 1997.

Parker, M.H., Jablonsky, M., Casjens, S. Sampson, L., Krishna, N.R., Prevelige Jr., P.E. (1997) Cloning, purification, an preliminary characterization by circular dichroism and NMR of a carboxyl-terminal domain of the bacteriophage P22 scaffolding protein. Protein Science 6: 1583-1586

Parker, M. Stafford III, W.F, Prevelige Jr. P.E. (1997)  Bacteriophage P22 Scaffolding Protein forms Oligomers in Solution. J. Mol. Biol  268:655-665.

Thuman-Commike, P.A., Greene, B., Jakana, J., Prasad, B.V.V., King, J., Prevelige, P.E. Jr., Chiu W. (1997) Three-dimensional Structure of Scaffolding Containing Phage P22 Procapsids by Electron Cyro-microscopy. J. Mol. Biol. 260:85-89

Tuma, R., Prevelige Jr. P.E., Thomas, G.J. (1996) Structural Transitions in the Scaffolding and Coat Proteins of P22 During Virus Assembly and Disassembly. Biochemistry 35:4619-4627.

Silva J.L, Foguel D., Da Poian, A.T. Prevelige Jr. P.E (1996). The Use of Hydrostatic Pressure as a Tool to Study Viruses and Other Macromolecular Assemblages. Current Opinion in Structural Biology 6:166-175

Foguel, D., Teschke, C.M., Prevelige Jr. P.E., and Silva J. (1995) The Role of Entropic Interactions in Stabilizing Viral Capsids: Single Amino Acid Substitutions in P22 Bacteriophage Coat Protein Resulting in Loss of Pressure Stability of the Shells Biochemistry 34 1120-1126.

Prevelige Jr., P.E. and Silva J, (1993) Pressure Denaturation of P22 Coat Protein Monomers and Its Entropic Stabilization in the Icosahedral Shells, Biophys.J. 66:1631-1641.

Teschke, C.M., King,J. and Prevelige Jr., P.E., (1993)Inhibition of Viral Capsid Assembly by 1,1'-bi(4-anilino)napthalene-5,5'-disulfonic acid (bisANS). Biochemistry 32:10658-10665

Prasad, B.V.V. Prevelige Jr., P.E., Marietta, E, Chen, R, Thomas, D, King, J, and Chiu, W. (1993) Structural Transformation Associated with Genome Packaging in a Bacterial Virus. J. Mol. Biol. 231:65-74

Prevelige Jr. P.E., Thomas, D, Aubrey, K.L., Towse, S.A., Thomas Jr. G.J. (1993) Subunit Conformational Changes Accompanying Bacteriophage P22 Capsid Maturation. Biochemistry 32:537-543

Prevelige Jr. P.E., Thomas, D., and King, J. (1993) Nucleation and Growth Phases in the Polymerization of Coat and Scaffolding Subunits into Icosahedral Shells Biophys. J. 64: 824-835

Prevelige Jr., P.E. (1993) The Assembly of Bacteriophage P22: A Model for ds-DNA Virus Assembly in Progress in Medical Virology Volume 40 (J. Melnick, ed) Karger Publishing, Basel

Thomas, D. and Prevelige Jr., P.E. (1991) A Pilot Protein Participates in the Initiation of P22 Procapsid Assembly Virology 182: 673-681.

Prevelige Jr., P.E., Thomas, D., King, J., Towse, S.,and Thomas, G.J. (1990) Conformational States of the Bacteriophage P22 Capsid Subunit in Relation to Self-Assembly. Biochemistry 29: 5626-5633

Prevelige Jr., P. E., Thomas, D. and King, J. (1988) Scaffolding Protein Regulates the Polymerization of P22 Coat Subunits into Icosahedral Shells in vitro.. J. Mol. Biol. 202: 743-757.

Department of Microbiology
University of Alabama at Birmingham
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